1YY6	Hydrolase	date	Feb 23, 2005
title	The Crystal Structure Of The N-Terminal Domain Of Hauspusp7 With An Ebna1 Peptide
authors	V.Saridakis, Y.Sheng, F.Sarkari, M.Holowaty, K.Shire, T.Nguyen, R. J.Liao, W.Lee, A.M.Edwards, C.H.Arrowsmith, L.Frappier
compound		source
Molecule: Ubiquitin Carboxyl-Terminal Hydrolase 7 Chain: A Synonym: Ubiquitin Thiolesterase 7, Ubiquitin-Specific Proc Protease 7, Deubiquitinating Enzyme 7, Herpesvirus Associat Ubiquitin-Specific Protease, Usp7, Hausp; Ec: 3.1.2.15 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Usp7, Hausp Expression_system: Escherichia Coli Bl21 Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
Molecule: Epstein-Barr Nuclear Antigen-1 Chain: B Synonym: Ebna1 Engineered: Yes Other_details: Usp7 Binding Peptide		Synthetic: Yes Other_details: The Sequence Of The Peptide Can Be Found Nat Epstein-Barr Virus
symmetry	Space Group: P 41	R_factor 0.198 R_Free 0.230
crystal cell	length a length b length c angle alpha angle beta angle gamma 70.050 70.050 45.930 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	NA	enzyme	Hydrolase E.C.3.1.2.15 BRENDA
Primary reference	Structure of the p53 binding domain of HAUSP/USP7 bound to Epstein-Barr nuclear antigen 1 implications for EBV-mediated immortalization., Saridakis V, Sheng Y, Sarkari F, Holowaty MN, Shire K, Nguyen T, Zhang RG, Liao J, Lee W, Edwards AM, Arrowsmith CH, Frappier L, Mol Cell. 2005 Apr 1;18(1):25-36. PMID:15808506

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk] Biological Unit Coordinates (1yy6.pdb1.gz) 29 Kb LPC: Ligand-Protein Contacts for 1YY6 CSU: Contacts of Structural Units for 1YY6 Likely Quarternary Molecular Structure file(s) for 1YY6 Structure Factors (191 Kb) Retrieve 1YY6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YY6 from S2C, [Save to disk] Re-refined 1yy6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YY6 in 3D

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Visual 3D analysis of 1YY6

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1YY6, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1yy6_A] [1yy6_B] [1yy6] SWISS-PROT database: [P03211] [Q93009] Domain organization of [EBNA1_EBVB9] [UBP7_HUMAN] by SWISSPFAM Domain found in 1YY6: [MATH ] by SMART

Other resources with information on 1YY6

Community annotation for 1YY6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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