1YYF	Chaperone Hydrolase	date	Feb 24, 2005
title	Correction Of X-Ray Intensities From An Hslv-Hslu Co-Crystal Containing Lattice Translocation Defects
authors	J.Wang, S.H.Rho, H.H.Park, S.H.Eom
compound		source
Molecule: Atp-Dependent Hsl Protease Atp-Binding Subunit Hs Chain: A, B Synonym: Heat Shock Protein Hslu Engineered: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Gene: Hslu, Htpi Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Atp-Dependent Protease Hslv Chain: D, C Ec: 3.4.25.- Engineered: Yes		Organism_scientific: Bacillus Subtilis Organism_taxid: 1423 Gene: Hslv, Clpq, Codw Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: H 3 2	R_factor 0.277 R_Free 0.346
crystal cell	length a length b length c angle alpha angle beta angle gamma 181.196 181.196 529.924 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	4.16 Å
ligand	ADP	enzyme	Hydrolase E.C.3.4.25 BRENDA
note	1YYF (Molecule of the Month:pdb80)
Gene Ontology	Chain Function Process Component A, B D, C
Primary reference	Correction of X-ray intensities from an HslV-HslU co-crystal containing lattice-translocation defects., Wang J, Rho SH, Park HH, Eom SH, Acta Crystallogr D Biol Crystallogr 2005 Jul;61(Pt 7):932-41. Epub 2005, Jun 24. PMID:15983416

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (191 Kb) [Save to disk] Biological Unit Coordinates (1yyf.pdb1.gz) 1080 Kb LPC: Ligand-Protein Contacts for 1YYF CSU: Contacts of Structural Units for 1YYF Likely Quarternary Molecular Structure file(s) for 1YYF Structure Factors (682 Kb) Retrieve 1YYF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1YYF from S2C, [Save to disk] Re-refined 1yyf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1YYF in 3D

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Visual 3D analysis of 1YYF

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1YYF, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1yyf_A] [1yyf_C] [1yyf_D] [1yyf_B] [1yyf] SWISS-PROT database: [P0A6H5] [P39070] Domain organization of [HSLU_ECOLI] [HSLV_BACSU] by SWISSPFAM Domains found in 1YYF: [AAA] [ClpB_D2-small ] by SMART

Other resources with information on 1YYF

Community annotation for 1YYF at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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