1Z10 Oxidoreductase date Mar 02, 2005
title Crystal Structure Of Human Microsomal P450 2a6 With Coumarin
authors J.K.Yano, M.H.Hsu, K.J.Griffin, C.D.Stout, E.F.Johnson
compound source
Molecule: Cytochrome P450, Family 2, Subfamily A, Polypepti
Chain: A, B, C, D
Fragment: Catalytic Domain
Ec: 1.14.14.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cyp2a6
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Dh-5 Alpha
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcwori
symmetry Space Group: P 1 21 1
R_factor 0.194 R_Free 0.230
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.615 157.591 103.541 90.00 92.25 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand COU, GOL, HEM enzyme Oxidoreductase E.C.1.14.14.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructures of human microsomal cytochrome P450 2A6 complexed with coumarin and methoxsalen., Yano JK, Hsu MH, Griffin KJ, Stout CD, Johnson EF, Nat Struct Mol Biol 2005 Aug 7;. PMID:16086027
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (322 Kb) [Save to disk]
  • Biological Unit Coordinates (1z10.pdb1.gz) 83 Kb
  • Biological Unit Coordinates (1z10.pdb2.gz) 81 Kb
  • Biological Unit Coordinates (1z10.pdb3.gz) 83 Kb
  • Biological Unit Coordinates (1z10.pdb4.gz) 82 Kb
  • LPC: Ligand-Protein Contacts for 1Z10
  • CSU: Contacts of Structural Units for 1Z10
  • Likely Quarternary Molecular Structure file(s) for 1Z10
  • Structure Factors (2480 Kb)
  • Retrieve 1Z10 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1Z10 from S2C, [Save to disk]
  • Re-refined 1z10 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1Z10 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1Z10
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1Z10, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1z10_A] [1z10_B] [1z10_C] [1z10] [1z10_D]
  • SWISS-PROT database: [P11509]
  • Domain organization of [CP2A6_HUMAN] by SWISSPFAM
  • Other resources with information on 1Z10
  • Community annotation for 1Z10 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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