1Z77 Transcription date Mar 24, 2005
title Crystal Structure Of Transcriptional Regulator Protein From Maritima.
authors K.D.Koclega, M.Chruszcz, M.D.Zimmerman, M.Cymborowski, M.Kudrits W.Minor, Midwest Center For Structural Genomics (Mcsg)
compound source
Molecule: Transcriptional Regulator (Tetr Family)
Chain: A
Engineered: Yes
Organism_scientific: Thermotoga Maritima
Organism_taxid: 2336
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834(De3)Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-15b
symmetry Space Group: P 21 21 2
R_factor 0.229 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.043 65.684 55.694 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand EDO, MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of a transcriptional regulator TM1030 from Thermotoga maritima solved by an unusual MAD experiment., Koclega KD, Chruszcz M, Zimmerman MD, Cymborowski M, Evdokimova E, Minor W, J Struct Biol. 2007 Sep;159(3):424-32. Epub 2007 May 16. PMID:17588774
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (1z77.pdb1.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 1Z77
  • CSU: Contacts of Structural Units for 1Z77
  • Likely Quarternary Molecular Structure file(s) for 1Z77
  • Structure Factors (94 Kb)
  • Retrieve 1Z77 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1Z77 from S2C, [Save to disk]
  • Re-refined 1z77 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1Z77 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1Z77
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1Z77, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1z77] [1z77_A]
  • SWISS-PROT database: [Q9X0C0]
  • Domain organization of [Q9X0C0_THEMA] by SWISSPFAM
  • Other resources with information on 1Z77
  • Community annotation for 1Z77 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science