1Z93 Lyase date Mar 31, 2005
title Human Carbonic Anhydrase III:Structural And Kinetic Study Of And Proton Transfer.
authors D.M.Duda, C.Tu, S.Z.Fisher, H.An, C.Yoshioka, L.Govindasamy, P.J.L M.Agbandje-Mckenna, D.N.Silverman, R.Mckenna
compound source
Molecule: Carbonic Anhydrase III
Chain: A
Synonym: Carbonate Dehydratase III, Ca- III
Ec: 4.2.1.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ca3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3) Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-81f1
symmetry Space Group: P 65
R_factor 0.205 R_Free 0.258
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.700 44.700 222.557 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.10 Å
ligand ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • phosphatase activity


  • Primary referenceHuman Carbonic Anhydrase III: Structural and Kinetic Study of Catalysis and Proton Transfer(,)., Duda DM, Tu C, Fisher SZ, An H, Yoshioka C, Govindasamy L, Laipis PJ, Agbandje-McKenna M, Silverman DN, McKenna R, Biochemistry 2005 Aug 2;44(30):10046-53. PMID:16042381
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (1z93.pdb1.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 1Z93
  • CSU: Contacts of Structural Units for 1Z93
  • Likely Quarternary Molecular Structure file(s) for 1Z93
  • Structure Factors (109 Kb)
  • Retrieve 1Z93 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1Z93 from S2C, [Save to disk]
  • Re-refined 1z93 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1Z93 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1Z93
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1Z93, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1z93] [1z93_A]
  • SWISS-PROT database: [P07451]
  • Domain organization of [CAH3_HUMAN] by SWISSPFAM
  • Domain found in 1Z93: [Carb_anhydrase ] by SMART
  • Other resources with information on 1Z93
  • Community annotation for 1Z93 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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