1ZBE Virus date Apr 08, 2005
title Foot-And Mouth Disease Virus Serotype A1061
authors E.E.Fry, J.W.Newman, S.Curry, S.Najjam, T.Jackson, W.Blakemore, S. L.Miller, A.Burman, A.M.King, D.I.Stuart
compound source
Molecule: Coat Protein Vp1
Chain: 1
Organism_scientific: Foot-And-Mouth Disease Virus
Organism_taxid: 12110

Molecule: Coat Protein Vp2
Chain: 2

Organism_scientific: Foot-And-Mouth Disease Virus
Organism_taxid: 12110

Molecule: Coat Protein Vp3
Chain: 3

Organism_scientific: Foot-And-Mouth Disease Virus
Organism_taxid: 12110

Molecule: Coat Protein Vp4
Chain: 4

Organism_scientific: Foot-And-Mouth Disease Virus
Organism_taxid: 12110
symmetry Space Group: H 3
R_factor 0.214 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
306.200 306.200 712.800 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.00 Å
Gene
Ontology
ChainFunctionProcessComponent
1


3, 2


4


Primary referenceStructure of Foot-and-mouth disease virus serotype A1061 alone and complexed with oligosaccharide receptor: receptor conservation in the face of antigenic variation., Fry EE, Newman JW, Curry S, Najjam S, Jackson T, Blakemore W, Lea SM, Miller L, Burman A, King AM, Stuart DI, J Gen Virol 2005 Jul;86(Pt 7):1909-20. PMID:15958669
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (112 Kb) [Save to disk]
  • Biological Unit Coordinates (1zbe.pdb1.gz) 6137 Kb
  • CSU: Contacts of Structural Units for 1ZBE
  • Likely Quarternary Molecular Structure file(s) for 1ZBE
  • Retrieve 1ZBE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZBE from S2C, [Save to disk]
  • View 1ZBE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ZBE
  • VIPERdb: visual, structural and computational analysis of 1ZBE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZBE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zbe_3] [1zbe_4] [1zbe_1] [1zbe_2] [1zbe]
  • SWISS-PROT database: [P03306]
  • Domain organization of [POLG_FMDV1] by SWISSPFAM
  • Other resources with information on 1ZBE
  • Community annotation for 1ZBE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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