1ZEC NMR Solution structure of NEF1-25, 20 structures date
authors Barnham, K.J., Monks, S.A., Hinds, M.G., Azad, A.A., Norton, R.S.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 20 Modelsresolution
ligand ACE, NH2 enzyme
note 1ZEC is a representative structure
Primary referenceSolution structure of a polypeptide from the N terminus of the HIV protein Nef., Barnham KJ, Monks SA, Hinds MG, Azad AA, Norton RS, Biochemistry 1997 May 20;36(20):5970-80. PMID:9166767
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (139 Kb) [Save to disk]
  • Biological Unit Coordinates (1zec.pdb1.gz) 7 Kb
  • LPC: Ligand-Protein Contacts for 1ZEC
  • CSU: Contacts of Structural Units for 1ZEC
  • Original NMR restraints for 1ZEC from PDB
  • Retrieve 1ZEC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZEC from S2C, [Save to disk]
  • View 1ZEC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ZEC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZEC, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1zec__, region [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zec] [1zec_A]
  • SWISS-PROT database: [P04324] [P03404]
  • Domain organization of [NEF_HV112] [NEF_HV1B1] by SWISSPFAM
  • Other resources with information on 1ZEC
  • Community annotation for 1ZEC at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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