1ZJY Oxidoreductase date May 02, 2005
title Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) Lactobacillus Brevis In Complex With Phenylethanol And Nadh
authors N.H.Schlieben, K.Niefind, J.Muller, B.Riebel, W.Hummel, D.Schombu
compound source
Molecule: R-Specific Alcohol Dehydrogenase
Chain: A
Ec: 1.1.1.2
Engineered: Yes
Mutation: Yes
 Organism_scientific: Lactobacillus Brevis
Organism_taxid: 1580
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Hb101
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pkk177-3h
symmetry Space Group: I 2 2 2
R_factor 0.138 R_Free 0.152
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.560 79.614 112.912 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.05 Å
ligand MG, NAI, SS2 enzyme Oxidoreductase E.C.1.1.1.2 BRENDA
related structures by homologous chain: 1ZJZ, 1ZK4
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAtomic resolution structures of R-specific alcohol dehydrogenase from Lactobacillus brevis provide the structural bases of its substrate and cosubstrate specificity., Schlieben NH, Niefind K, Muller J, Riebel B, Hummel W, Schomburg D, J Mol Biol 2005 Jun 17;349(4):801-13. PMID:15896805
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (115 Kb) [Save to disk]
  • Biological Unit Coordinates (1zjy.pdb1.gz) 434 Kb
  • LPC: Ligand-Protein Contacts for 1ZJY
  • CSU: Contacts of Structural Units for 1ZJY
  • Likely Quarternary Molecular Structure file(s) for 1ZJY
  • Structure Factors (805 Kb)
  • Retrieve 1ZJY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZJY from S2C, [Save to disk]
  • Re-refined 1zjy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1ZJY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ZJY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZJY, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zjy] [1zjy_A]
  • SWISS-PROT database: [Q84EX5]
  • Domain organization of [Q84EX5_LACBR] by SWISSPFAM
    • Other resources with information on 1ZJY
  • Community annotation for 1ZJY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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