1ZLA	Structural Protein Dna	date	May 05, 2005
title	X-Ray Structure Of A Kaposi'S Sarcoma Herpesvirus Lana Pepti To The Nucleosomal Core
authors	J.V.Chodaparambil, A.J.Barbera, K.M.Kaye, K.Luger
compound		source
Molecule: Palindromic 146bp Human Alpha-Satellite Dna Fragm Chain: I, J Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Alpha-Satellite Dna Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Hb 101 Expression_system_vector_type: Plasmid Expression_system_plasmid: Puc
Molecule: Histone H3 Chain: A, E Engineered: Yes		Organism_scientific: Xenopus Laevis Organism_common: African Clawed Frog Organism_taxid: 8355 Gene: Histone H3 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 De3 Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet
Molecule: Histone H4 Chain: B, F Engineered: Yes		Organism_scientific: Xenopus Laevis Organism_common: African Clawed Frog Organism_taxid: 8355 Gene: Histone H4 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 De3 Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet
Molecule: Xenopus Laevis-Like Histone H2a Chain: C, G Engineered: Yes		Organism_scientific: Expression Vector Pet3-H2a Organism_taxid: 263730 Gene: Histone H2a Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 De3 Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet
Molecule: Histone H2b Chain: D, H Engineered: Yes		Organism_scientific: Xenopus Laevis Organism_common: African Clawed Frog Organism_taxid: 8355 Gene: Histone H2b Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 De3 Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet
Molecule: Latent Nuclear Antigen Chain: K Engineered: Yes		Synthetic: Yes Other_details: N-Terminal 1-23 Amino Acid Region Of Latency Associated Nuclear Antigen (Lana)Protein Of Kaposi'S Sarcom Herpesvirus (Kshv)
symmetry	Space Group: P 21 21 21	R_factor 0.222 R_Free 0.277
crystal cell	length a length b length c angle alpha angle beta angle gamma 106.162 109.599 182.237 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.90 Å
Gene Ontology	Chain Function Process Component A, E C, G F, B H, D
Primary reference	The nucleosomal surface as a docking station for Kaposi's sarcoma herpesvirus LANA., Barbera AJ, Chodaparambil JV, Kelley-Clarke B, Joukov V, Walter JC, Luger K, Kaye KM, Science. 2006 Feb 10;311(5762):856-61. PMID:16469929

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (246 Kb) [Save to disk] Biological Unit Coordinates (1zla.pdb1.gz) 239 Kb CSU: Contacts of Structural Units for 1ZLA Likely Quarternary Molecular Structure file(s) for 1ZLA Structure Factors (705 Kb) Retrieve 1ZLA in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1ZLA from S2C, [Save to disk] Re-refined 1zla structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1ZLA in 3D

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Visual 3D analysis of 1ZLA

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1ZLA, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1zla_G] [1zla_K] [1zla_I] [1zla_B] [1zla_D] [1zla_A] [1zla_J] [1zla_C] [1zla_F] [1zla_H] [1zla_E] [1zla] SWISS-PROT database: [P06897] [P02281] [P84233] [P62799] Domain organization of [H2A1_XENLA] [H2B11_XENLA] [H32_XENLA] [H4_XENLA] by SWISSPFAM Domains found in 1ZLA: [H2A] [H2B] [H3] [H4 ] by SMART

Other resources with information on 1ZLA

Community annotation for 1ZLA at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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