1ZM0 Lipid Binding Protein date May 09, 2005
title Crystal Structure Of The Carboxyl Terminal Ph Domain Of Plec 2.1 Angstroms
authors S.G.Jackson, Y.Zhang, K.Zhang, R.Summerfield, R.J.Haslam, M.S.Jun
compound source
Molecule: Pleckstrin
Chain: A, B
Fragment: Ph2 Domain
Synonym: Platelet P47 Protein
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Plek, P47
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-4t-1
symmetry Space Group: P 41 21 2
R_factor 0.236 R_Free 0.244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.572 54.572 148.213 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
Primary referenceStructure of the carboxy-terminal PH domain of pleckstrin at 2.1 Angstroms., Jackson SG, Zhang Y, Bao X, Zhang K, Summerfield R, Haslam RJ, Junop MS, Acta Crystallogr D Biol Crystallogr. 2006 Mar;62(Pt 3):324-30. Epub 2006, Feb 22. PMID:16510979
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (1zm0.pdb1.gz) 18 Kb
  • Biological Unit Coordinates (1zm0.pdb2.gz) 18 Kb
  • Biological Unit Coordinates (1zm0.pdb3.gz) 35 Kb
  • CSU: Contacts of Structural Units for 1ZM0
  • Likely Quarternary Molecular Structure file(s) for 1ZM0
  • Structure Factors (109 Kb)
  • Retrieve 1ZM0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZM0 from S2C, [Save to disk]
  • Re-refined 1zm0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1ZM0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ZM0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZM0, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zm0_B] [1zm0] [1zm0_A]
  • SWISS-PROT database: [P08567]
  • Domain organization of [PLEK_HUMAN] by SWISSPFAM
  • Domain found in 1ZM0: [PH ] by SMART
    • Other resources with information on 1ZM0
  • Community annotation for 1ZM0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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