1ZM3	Biosynthetic Protein Transferase	date	May 10, 2005
title	Structure Of The Apo Eef2-Eta Complex
authors	R.Joergensen, A.R.Merrill, S.P.Yates, V.E.Marquez, A.L.Schwan, T. G.R.Andersen
compound		source
Molecule: Elongation Factor 2 Chain: A, C, E Synonym: Ef-2		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932
Molecule: Exotoxin A Chain: B, D, F Fragment: Catalytic Domain Synonym: Nad-Dependent Adp-Ribosyltransferase Ec: 2.4.2.36 Engineered: Yes		Organism_scientific: Pseudomonas Aeruginosa Organism_taxid: 287 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 1 2 1	R_factor 0.249 R_Free 0.282
crystal cell	length a length b length c angle alpha angle beta angle gamma 329.430 69.090 190.800 90.00 103.46 90.00
method	X-Ray Diffraction	resolution	3.07 Å
ligand	DDE	enzyme	Transferase E.C.2.4.2.36 BRENDA
Gene Ontology	Chain Function Process Component A, C, E F, D, B
Primary reference	Exotoxin A-eEF2 complex structure indicates ADP ribosylation by ribosome mimicry., Jorgensen R, Merrill AR, Yates SP, Marquez VE, Schwan AL, Boesen T, Andersen GR, Nature 2005 Aug 18;436(7053):979-84. PMID:16107839

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (481 Kb) [Save to disk] Biological Unit Coordinates (1zm3.pdb1.gz) 163 Kb Biological Unit Coordinates (1zm3.pdb2.gz) 163 Kb Biological Unit Coordinates (1zm3.pdb3.gz) 163 Kb LPC: Ligand-Protein Contacts for 1ZM3 CSU: Contacts of Structural Units for 1ZM3 Likely Quarternary Molecular Structure file(s) for 1ZM3 Structure Factors (689 Kb) Retrieve 1ZM3 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1ZM3 from S2C, [Save to disk] Re-refined 1zm3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1ZM3 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1ZM3

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1ZM3, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1zm3_A] [1zm3_B] [1zm3_F] [1zm3] [1zm3_D] [1zm3_E] [1zm3_C] SWISS-PROT database: [P32324] [P11439] Belongs to the pseudomonas exotoxin a (p-exoa) family according to TCDB. Domain organization of [EF2_YEAST] [TOXA_PSEAE] by SWISSPFAM Domains found in 1ZM3: [EFG_C] [EFG_IV ] by SMART

Other resources with information on 1ZM3

Community annotation for 1ZM3 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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