1ZP4 Oxidoreductase date May 16, 2005
title Glu28gln Mutant Of E. Coli Methylenetetrahydrofolate Reducta (Oxidized) Complex With Methyltetrahydrofolate
authors R.Pejchal, R.Sargeant, M.L.Ludwig
compound source
Molecule: 5,10-Methylenetetrahydrofolate Reductase
Chain: A, B, C
Ec: 1.7.99.5
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Metf
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet23b
symmetry Space Group: C 1 2 1
R_factor 0.213 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
103.590 127.810 97.950 90.00 121.88 90.00
method X-Ray Diffractionresolution 1.85 Å
ligand C2F, FAD, SO4 enzyme Oxidoreductase E.C.1.7.99.5 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceStructures of NADH and CH(3)-H(4)Folate Complexes of Escherichia coli Methylenetetrahydrofolate Reductase Reveal a Spartan Strategy for a Ping-Pong Reaction(,)., Pejchal R, Sargeant R, Ludwig ML, Biochemistry 2005 Aug 30;44(34):11447-57. PMID:16114881
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk]
  • Biological Unit Coordinates (1zp4.pdb1.gz) 192 Kb
  • LPC: Ligand-Protein Contacts for 1ZP4
  • CSU: Contacts of Structural Units for 1ZP4
  • Likely Quarternary Molecular Structure file(s) for 1ZP4
  • Structure Factors (1047 Kb)
  • Retrieve 1ZP4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZP4 from S2C, [Save to disk]
  • Re-refined 1zp4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1ZP4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ZP4
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZP4, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zp4] [1zp4_A] [1zp4_C] [1zp4_B]
  • SWISS-PROT database: [P0AEZ1]
  • Domain organization of [METF_ECOLI] by SWISSPFAM
  • Other resources with information on 1ZP4
  • Community annotation for 1ZP4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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