1ZR9 Transcription date May 19, 2005
title Solution Structure Of A Human C2h2-Type Zinc Finger Protein
authors B.L.Lytle, F.C.Peterson, B.F.Volkman, Center For Eukaryotic Str Genomics (Cesg)
compound source
Molecule: Zinc Finger Protein 593
Chain: A
Synonym: Zinc Finger Protein T86, Zinc Finger Protein Loc51
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Znf593
Expression_system: Cell-Free Synthesis
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Peu(N)His6
Other_details: Wheat Germ Cell-Free, In Vitro Expression
methodSolution NMR
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe solution structure of ZNF593 from Homo sapiens reveals a zinc finger in a predominantly unstructured protein., Hayes PL, Lytle BL, Volkman BF, Peterson FC, Protein Sci. 2008 Mar;17(3):571-6. PMID:18287285
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (351 Kb) [Save to disk]
  • Biological Unit Coordinates (1zr9.pdb1.gz) 18 Kb
  • LPC: Ligand-Protein Contacts for 1ZR9
  • CSU: Contacts of Structural Units for 1ZR9
  • Original NMR restraints for 1ZR9 from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1ZR9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZR9 from S2C, [Save to disk]
  • View 1ZR9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ZR9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZR9, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zr9] [1zr9_A]
  • SWISS-PROT database: [O00488]
  • Domain organization of [ZN593_HUMAN] by SWISSPFAM
  • Domain found in 1ZR9: [ZnF_C2H2 ] by SMART
  • Other resources with information on 1ZR9
  • Community annotation for 1ZR9 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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