1ZU4 Protein Transport date May 30, 2005
title Crystal Structure Of Ftsy From Mycoplasma Mycoides- Space Gr
authors T.Gariani, T.Samuelsson, A.E.Sauer-Eriksson
compound source
Molecule: Ftsy
Chain: A
Fragment: Ng Domain
Synonym: Srp Receptor Ftsy
Engineered: Yes
Organism_scientific: Mycoplasma Mycoides
Organism_taxid: 2102
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet9d
symmetry Space Group: P 21 21 2
R_factor 0.207 R_Free 0.264
crystal
cell
length a length b length c angle alpha angle beta angle gamma
68.735 101.129 42.533 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.95 Å
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceConformational variability of the GTPase domain of the signal recognition particle receptor FtsY., Gariani T, Samuelsson T, Sauer-Eriksson AE, J Struct Biol. 2006 Jan;153(1):85-96. Epub 2005 Nov 30. PMID:16343944
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (1zu4.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 1ZU4
  • CSU: Contacts of Structural Units for 1ZU4
  • Likely Quarternary Molecular Structure file(s) for 1ZU4
  • Structure Factors (168 Kb)
  • Retrieve 1ZU4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZU4 from S2C, [Save to disk]
  • Re-refined 1zu4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1ZU4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ZU4
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZU4, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zu4_A] [1zu4]
  • SWISS-PROT database: [Q6MTB9]
  • Domain organization of [Q6MTB9_MYCMS] by SWISSPFAM
  • Domains found in 1ZU4: [AAA] [SRP54] [SRP54_N ] by SMART
  • Other resources with information on 1ZU4
  • Community annotation for 1ZU4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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