1ZWP Hydrolase date Jun 04, 2005
title The Atomic Resolution Crystal Structure Of The Phospholipase Complex With Nimesulide Reveals Its Weaker Binding To Pla2
authors R.Prem Kumar, N.Singh, S.Sharma, P.Kaur, T.P.Singh
compound source
Molecule: Phospholipase A2 Vrv-Pl-Viiia
Chain: A
Synonym: Phosphatidylcholine 2-Acylhydrolase, Dpla2
Ec: 3.1.1.4
 Organism_scientific: Daboia Russellii Pulchella
Organism_taxid: 97228
Strain: Viper Russells
symmetry Space Group: P 43
R_factor 0.130 R_Free 0.147
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.273 52.273 47.804 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.10 Å
ligand MOH, NIM, SO4 enzyme Hydrolase E.C.3.1.1.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (1zwp.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 1ZWP
  • CSU: Contacts of Structural Units for 1ZWP
  • Likely Quarternary Molecular Structure file(s) for 1ZWP
  • Retrieve 1ZWP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZWP from S2C, [Save to disk]
    • View 1ZWP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ZWP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZWP, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zwp] [1zwp_A]
  • SWISS-PROT database: [P59071]
  • Domain organization of [PA28_DABRR] by SWISSPFAM
  • Domain found in 1ZWP: [PA2c ] by SMART
    • Other resources with information on 1ZWP
  • Community annotation for 1ZWP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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