1ZXJ Structural Genomics, Unknown Function date Jun 08, 2005
title Crystal Structure Of The Hypthetical Mycoplasma Protein, Mpn
authors U.Schulze-Gahmen, S.Aono, C.Shengfeng, H.Yokota, R.Kim, S.H.Kim, Structural Genomics Center (Bsgc)
compound source
Molecule: Hypothetical Protein Mg377 Homolog
Chain: A, B, C, D
Synonym: Mpn555
Engineered: Yes
Organism_scientific: Mycoplasma Pneumoniae
Organism_taxid: 2104
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Psjs1244
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pskb3
symmetry Space Group: C 1 2 1
R_factor 0.248 R_Free 0.322
crystal
cell
length a length b length c angle alpha angle beta angle gamma
132.370 45.590 153.930 90.00 111.40 90.00
method X-Ray Diffractionresolution 2.80 Å
note 1ZXJ is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructure of the hypothetical Mycoplasma protein MPN555 suggests a chaperone function., Schulze-Gahmen U, Aono S, Chen S, Yokota H, Kim R, Kim SH, Acta Crystallogr D Biol Crystallogr 2005 Oct 1;61(Pt 10):1343-1347. Epub, 2005 Sep 28. PMID:16204885
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk]
  • Biological Unit Coordinates (1zxj.pdb1.gz) 32 Kb
  • Biological Unit Coordinates (1zxj.pdb2.gz) 28 Kb
  • Biological Unit Coordinates (1zxj.pdb3.gz) 32 Kb
  • Biological Unit Coordinates (1zxj.pdb4.gz) 32 Kb
  • Biological Unit Coordinates (1zxj.pdb5.gz) 121 Kb
  • Biological Unit Coordinates (1zxj.pdb6.gz) 115 Kb
  • Biological Unit Coordinates (1zxj.pdb7.gz) 61 Kb
  • Biological Unit Coordinates (1zxj.pdb8.gz) 59 Kb
  • Biological Unit Coordinates (1zxj.pdb9.gz) 55 Kb
  • CSU: Contacts of Structural Units for 1ZXJ
  • Likely Quarternary Molecular Structure file(s) for 1ZXJ
  • Structure Factors (320 Kb)
  • Retrieve 1ZXJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZXJ from S2C, [Save to disk]
  • Re-refined 1zxj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1ZXJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ZXJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZXJ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zxj] [1zxj_B] [1zxj_C] [1zxj_D] [1zxj_A]
  • SWISS-PROT database: [P75223]
  • Domain organization of [Y555_MYCPN] by SWISSPFAM
  • Other resources with information on 1ZXJ
  • Community annotation for 1ZXJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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