1ZZ2 Transferase date Jun 13, 2005
title Two Classes Of P38alpha Map Kinase Inhibitors Having A Commo Diphenylether Core But Exhibiting Divergent Binding Modes
authors E.L.Michelotti, K.K.Moffett, E.B.Springman, M.Karpusas
compound source
Molecule: Mitogen-Activated Protein Kinase 14
Chain: A
Synonym: Mitogen-Activated Protein Kinase P38 Alpha, Map Ki Alpha, Cytokine Suppressive Anti-Inflammatory Drug Binding Csaid Binding Protein, Csbp, Max-Interacting Protein 2, Map Mxi2, Sapk2a;
Ec: 2.7.1.37
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mapk14, Csbp, Csbp1, Csbp2, Mxi2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta De3
symmetry Space Group: P 21 21 21
R_factor 0.256 R_Free 0.290
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.290 74.230 74.420 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand B11, BOG BindingDB enzyme Transferase E.C.2.7.1.37 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceTwo classes of p38alpha MAP kinase inhibitors having a common diphenylether core but exhibiting divergent binding modes., Michelotti EL, Moffett KK, Nguyen D, Kelly MJ, Shetty R, Chai X, Northrop K, Namboodiri V, Campbell B, Flynn GA, Fujimoto T, Hollinger FP, Bukhtiyarova M, Springman EB, Karpusas M, Bioorg Med Chem Lett 2005 Sep 15;. PMID:16169718
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk]
  • Biological Unit Coordinates (1zz2.pdb1.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 1ZZ2
  • CSU: Contacts of Structural Units for 1ZZ2
  • Likely Quarternary Molecular Structure file(s) for 1ZZ2
  • Structure Factors (516 Kb)
  • Retrieve 1ZZ2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZZ2 from S2C, [Save to disk]
  • Re-refined 1zz2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1ZZ2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ZZ2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZZ2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zz2_A] [1zz2]
  • SWISS-PROT database: [Q16539]
  • Domain organization of [MK14_HUMAN] by SWISSPFAM
  • Domain found in 1ZZ2: [S_TKc ] by SMART
  • Other resources with information on 1ZZ2
  • Community annotation for 1ZZ2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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