256D Dna date Mar 31, 1996
title Alternating And Non-Alternating Dg-Dc Hexanucleotides Crysta Canonical A-Dna
authors B.H.Mooers, G.P.Schroth, W.W.Baxter, P.S.Ho
compound source
Molecule: Dna (5'-D(Gp(5cm)Pgpcpgpc)-3')
Chain: A, B
Engineered: Yes
 Synthetic: Yes
symmetry Space Group: C 2 2 21
R_factor 0.148 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
39.440 45.840 39.520 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand 5CM enzyme
Primary referenceAlternating and non-alternating dG-dC hexanucleotides crystallize as canonical A-DNA., Mooers BH, Schroth GP, Baxter WW, Ho PS, J Mol Biol 1995 Jun 16;249(4):772-84. PMID:7602589
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (10 Kb) [Save to disk]
  • Biological Unit Coordinates (256d.pdb1.gz) 6 Kb
  • LPC: Ligand-Protein Contacts for 256D
  • CSU: Contacts of Structural Units for 256D
  • Likely Quarternary Molecular Structure file(s) for 256D
  • Structure Factors (14 Kb)
  • Retrieve 256D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 256D from S2C, [Save to disk]
  • Re-refined 256d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 256D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 256D
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 256D, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [256d_B] [256d_A] [256d]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 256D
  • Community annotation for 256D at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science