276D Dna date Jul 22, 1996
title Substitutions At C2' Of Daunosamine In The Anticancer Daunor Alter Its Dna-Binding Sequence Specificity
authors Y.G.Gao, W.Priebe, A.H.J.Wang
compound source
Molecule: Dna (5'-D(Cpgpaptpcpg)-3')
Chain: A
Engineered: Yes
Synthetic: Yes
symmetry Space Group: P 41 21 2
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
28.090 28.090 53.380 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand DM8 enzyme
Primary referenceSubstitutions at C2' of daunosamine in the anticancer drug daunorubicin alter its DNA-binding sequence specificity., Gao YG, Priebe W, Wang AH, Eur J Biochem 1996 Sep 1;240(2):331-5. PMID:8841395
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (8 Kb) [Save to disk]
  • Biological Unit Coordinates (276d.pdb1.gz) 7 Kb
  • LPC: Ligand-Protein Contacts for 276D
  • CSU: Contacts of Structural Units for 276D
  • Likely Quarternary Molecular Structure file(s) for 276D
  • Retrieve 276D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 276D from S2C, [Save to disk]
  • View 276D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 276D
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 276D, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [276d] [276d_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 276D
  • Community annotation for 276D at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science