2A0C Transferase date Jun 16, 2005
title Human Cdk2 In Complex With Olomoucine II, A Novel 2,6,9-Tris Purine Cyclin-Dependent Kinase Inhibitor
authors V.Krystof, I.W.Mcnae, M.D.Walkinshaw, P.M.Fischer, P.Muller, B.Vo M.Orsag, L.Havlicek, M.Strnad
compound source
Molecule: Cell Division Protein Kinase 2
Chain: X
Synonym: Cyclin Dependant Kinase 2, Cdk2, P33 Protein Kinas
Ec: 2.7.1.37
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cdk2
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 21 21 21
R_factor 0.191 R_Free 0.244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.242 70.945 71.869 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.95 Å
ligand CK9 enzyme Transferase E.C.2.7.1.37 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
X


Primary referenceAntiproliferative activity of olomoucine II, a novel 2,6,9-trisubstituted purine cyclin-dependent kinase inhibitor., Krystof V, McNae IW, Walkinshaw MD, Fischer PM, Muller P, Vojtesek B, Orsag M, Havlicek L, Strnad M, Cell Mol Life Sci. 2005 Aug;62(15):1763-71. PMID:16003486
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (2a0c.pdb1.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 2A0C
  • CSU: Contacts of Structural Units for 2A0C
  • Likely Quarternary Molecular Structure file(s) for 2A0C
  • Structure Factors (340 Kb)
  • Retrieve 2A0C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2A0C from S2C, [Save to disk]
  • Re-refined 2a0c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2A0C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2A0C
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2A0C, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2a0c_X] [2a0c]
  • SWISS-PROT database: [P24941]
  • Domain organization of [CDK2_HUMAN] by SWISSPFAM
  • Domain found in 2A0C: [S_TKc ] by SMART
  • Other resources with information on 2A0C
  • Community annotation for 2A0C at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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