2A31 Hydrolase date Jun 23, 2005
title Trypsin In Complex With Borate
authors T.R.Transue, S.A.Gabel, R.E.London
compound source
Molecule: Trypsin
Chain: A
Ec: 3.4.21.4
Organism_scientific: Sus Scrofa
Organism_common: Pig
Organism_taxid: 9823
Organ: Pancreas
symmetry Space Group: P 21 21 21
R_factor 0.140 R_Free 0.162
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.304 53.446 46.466 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.25 Å
ligand BO4, CA, MG, NA, PG3, SO4 enzyme Hydrolase E.C.3.4.21.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR and crystallographic characterization of adventitious borate binding by trypsin., Transue TR, Gabel SA, London RE, Bioconjug Chem. 2006 Mar-Apr;17(2):300-8. PMID:16536459
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk]
  • Biological Unit Coordinates (2a31.pdb1.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 2A31
  • CSU: Contacts of Structural Units for 2A31
  • Likely Quarternary Molecular Structure file(s) for 2A31
  • Structure Factors (734 Kb)
  • Retrieve 2A31 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2A31 from S2C, [Save to disk]
  • Re-refined 2a31 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2A31 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2A31
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2A31, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2a31_A] [2a31]
  • SWISS-PROT database: [P00761]
  • Domain organization of [TRYP_PIG] by SWISSPFAM
  • Domain found in 2A31: [Tryp_SPc ] by SMART
  • Other resources with information on 2A31
  • Community annotation for 2A31 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science