2A46 Luminescent Protein date Jun 28, 2005
title Crystal Structures Of Amfp486, A Cyan Fluorescent Protein Fr Anemonia Majano, And Variants
authors J.N.Henderson, S.J.Remington
compound source
Molecule: Gfp-Like Fluorescent Chromoprotein Amfp486
Chain: A
Engineered: Yes
Organism_scientific: Anemonia Majano
Organism_taxid: 105399
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm109 De3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe-30
symmetry Space Group: I 41 2 2
R_factor 0.165 R_Free 0.208
crystal
cell
length a length b length c angle alpha angle beta angle gamma
112.541 112.541 81.436 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.65 Å
ligand BME, CR7 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structures and mutational analysis of amFP486, a cyan fluorescent protein from Anemonia majano., Henderson JN, Remington SJ, Proc Natl Acad Sci U S A 2005 Sep 6;102(36):12712-7. Epub 2005 Aug 24. PMID:16120682
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (2a46.pdb1.gz) 148 Kb
  • LPC: Ligand-Protein Contacts for 2A46
  • CSU: Contacts of Structural Units for 2A46
  • Likely Quarternary Molecular Structure file(s) for 2A46
  • Structure Factors (221 Kb)
  • Retrieve 2A46 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2A46 from S2C, [Save to disk]
  • Re-refined 2a46 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2A46 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2A46
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2A46, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2a46] [2a46_A]
  • SWISS-PROT database: [Q9U6Y6]
  • Domain organization of [GFPL_ANEMA] by SWISSPFAM
  • Other resources with information on 2A46
  • Community annotation for 2A46 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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