2A4Z Transferase date Jun 30, 2005
title Crystal Structure Of Human Pi3kgamma Complexed With As604850
authors M.Camps, T.Ruckle, H.Ji, V.Ardissone, F.Rintelen, J.Shaw, C.Ferran C.Chabert, C.Gillieron, B.Francon, T.Martin, D.Gretener, D.Perri D.Leroy, P.A.Vitte, E.Hirsch, M.P.Wymann, R.Cirillo, M.K.Schwar C.Rommel
compound source
Molecule: Phosphatidylinositol-4,5-Bisphosphate 3-Kinase Ca Subunit, Gamma Isoform;
Chain: A
Fragment: P110 Subunit Gamma, Residues 143-1101
Synonym: Phosphatidylinositol 3-Kinase Catalytic Subunit, P P110 Subunit Gamma, Ptdins- 3-Kinase P110, Pi3k, Pi3kgamma;
Ec: 2.7.1.153
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell_line: Sf9
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_vector_type: Baculovirus
Expression_system_vector: Pvl1393
symmetry Space Group: C 1 2 1
R_factor 0.257 R_Free 0.352
crystal
cell
length a length b length c angle alpha angle beta angle gamma
142.352 67.648 106.390 90.00 95.77 90.00
method X-Ray Diffractionresolution 2.90 Å
ligand BYM enzyme Transferase E.C.2.7.1.153 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceBlockade of PI3Kgamma suppresses joint inflammation and damage in mouse models of rheumatoid arthritis., Camps M, Ruckle T, Ji H, Ardissone V, Rintelen F, Shaw J, Ferrandi C, Chabert C, Gillieron C, Francon B, Martin T, Gretener D, Perrin D, Leroy D, Vitte PA, Hirsch E, Wymann MP, Cirillo R, Schwarz MK, Rommel C, Nat Med 2005 Sep;11(9):936-43. Epub 2005 Aug 28. PMID:16127437
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk]
  • Biological Unit Coordinates (2a4z.pdb1.gz) 127 Kb
  • LPC: Ligand-Protein Contacts for 2A4Z
  • CSU: Contacts of Structural Units for 2A4Z
  • Likely Quarternary Molecular Structure file(s) for 2A4Z
  • Structure Factors (174 Kb)
  • Retrieve 2A4Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2A4Z from S2C, [Save to disk]
  • Re-refined 2a4z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2A4Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2A4Z
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2A4Z, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2a4z] [2a4z_A]
  • SWISS-PROT database: [P48736]
  • Domain organization of [PK3CG_HUMAN] by SWISSPFAM
  • Domains found in 2A4Z: [PI3K_C2] [PI3K_rbd] [PI3Ka] [PI3Kc ] by SMART
  • Other resources with information on 2A4Z
  • Community annotation for 2A4Z at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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