2ANO Oxidoreductase date Aug 11, 2005
title Crystal Structure Of E.Coli Dihydrofolate Reductase In Compl Nadph And The Inhibitor Ms-Sh08-17
authors R.L.Summerfield, D.M.Daigle, S.Mayer, S.G.Jackson, M.Organ, D.W.H E.D.Brown, M.S.Junop
compound source
Molecule: Dihydrofolate Reductase
Chain: A
Ec: 1.5.1.3
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Fola, Tmra
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pfw117.1 Dhfr
symmetry Space Group: P 21 21 21
R_factor 0.237 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
34.130 44.140 97.784 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.68 Å
ligand 817, MN, NDP BindingDB enzyme Oxidoreductase E.C.1.5.1.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA 2.13 A Structure of E. coli Dihydrofolate Reductase Bound to a Novel Competitive Inhibitor Reveals a New Binding Surface Involving the M20 Loop Region., Summerfield RL, Daigle DM, Mayer S, Mallik D, Hughes DW, Jackson SG, Sulek M, Organ MG, Brown ED, Junop MS, J Med Chem. 2006 Nov 30;49(24):6977-6986. PMID:17125251
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk]
  • Biological Unit Coordinates (2ano.pdb1.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 2ANO
  • CSU: Contacts of Structural Units for 2ANO
  • Likely Quarternary Molecular Structure file(s) for 2ANO
  • Structure Factors (24 Kb)
  • Retrieve 2ANO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ANO from S2C, [Save to disk]
  • Re-refined 2ano structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2ANO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ANO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ANO, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ano] [2ano_A]
  • SWISS-PROT database: [P0ABQ4]
  • Domain organization of [DYR_ECOLI] by SWISSPFAM
  • Other resources with information on 2ANO
  • Community annotation for 2ANO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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