2AP8 Antibiotic date Aug 15, 2005
title Solution Structure Of Bombinin H4 In Dpc Micelles
authors K.Zangger, A.Jilek, L.Khatai
compound source
Molecule: Bombinin H4
Chain: A
Engineered: Yes
Synthetic: Yes
Organism_scientific: Bombina Variegata
Organism_taxid: 8348
Other_details: Solid-Phase Peptide Synthesis. The Sequence Peptide Is Naturally Found In Bombina Variegata
methodSolution NMR
ligand DIL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk]
  • Biological Unit Coordinates (2ap8.pdb1.gz) 5 Kb
  • LPC: Ligand-Protein Contacts for 2AP8
  • CSU: Contacts of Structural Units for 2AP8
  • Original NMR restraints for 2AP8 from PDB
  • Retrieve 2AP8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2AP8 from S2C, [Save to disk]
  • View 2AP8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2AP8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2AP8, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ap8] [2ap8_A]
  • SWISS-PROT database: [P82285]
  • Domain organization of [BMNH5_BOMVA] by SWISSPFAM
  • Other resources with information on 2AP8
  • Community annotation for 2AP8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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