2B0F NMR Structure of the Human Rhinovirus 3C Protease (serotype 14) with covalently bound Ace-LEALFQ-ethylpropionate inhibitor date
authors Bjorndahl, T.C., Andrew, L.C., Wishart, D.S.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 20 Modelsresolution
ligand ACE, CA1, YTF enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR solution structures of the apo and peptide-inhibited human rhinovirus 3C protease (Serotype 14): structural and dynamic comparison., Bjorndahl TC, Andrew LC, Semenchenko V, Wishart DS, Biochemistry. 2007 Nov 13;46(45):12945-58. Epub 2007 Oct 18. PMID:17944485
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (962 Kb) [Save to disk]
  • Biological Unit Coordinates (2b0f.pdb1.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 2B0F
  • CSU: Contacts of Structural Units for 2B0F
  • Original NMR restraints for 2B0F from PDB
  • Retrieve 2B0F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2B0F from S2C, [Save to disk]
  • View 2B0F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2B0F
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2B0F, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2b0f] [2b0f_B] [2b0f_A]
  • SWISS-PROT database: [P03303]
  • Domain organization of [POLG_HRV14] by SWISSPFAM
  • Other resources with information on 2B0F
  • Community annotation for 2B0F at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science