2B0T	Oxidoreductase	date	Sep 14, 2005
title	Structure Of Monomeric Nadp Isocitrate Dehydrogenase
authors	F.Imabayashi, S.Aich, L.Prasad, L.T.Delbaere
compound		source
Molecule: Nadp Isocitrate Dehydrogenase Chain: A Synonym: Oxalosuccinate Decarboxylase, Idh Ec: 1.1.1.42		Organism_scientific: Corynebacterium Glutamicum Organism_taxid: 1718
symmetry	Space Group: C 1 2 1	R_factor 0.200 R_Free 0.230
crystal cell	length a length b length c angle alpha angle beta angle gamma 129.046 52.692 124.035 90.00 108.98 90.00
method	X-Ray Diffraction	resolution	1.75 Å
ligand	MG	enzyme	Oxidoreductase E.C.1.1.1.42 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Substrate-free structure of a monomeric NADP isocitrate dehydrogenase: An open conformation phylogenetic relationship of isocitrate dehydrogenase., Imabayashi F, Aich S, Prasad L, Delbaere LT, Proteins. 2006 Jan 13;. PMID:16416443

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk] Biological Unit Coordinates (2b0t.pdb1.gz) 120 Kb LPC: Ligand-Protein Contacts for 2B0T CSU: Contacts of Structural Units for 2B0T Likely Quarternary Molecular Structure file(s) for 2B0T Structure Factors (1127 Kb) Retrieve 2B0T in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2B0T from S2C, [Save to disk] Re-refined 2b0t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2B0T in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2B0T

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2B0T, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2b0t_A] [2b0t] SWISS-PROT database: [P50216] Domain organization of [IDH_CORGL] by SWISSPFAM

Other resources with information on 2B0T

Community annotation for 2B0T at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---