2B17	Hydrolase	date	Sep 15, 2005
title	Specific Binding Of Non-Steroidal Anti-Inflammatory Drugs (Nsaids) To Phospholipase A2: Crystal Structure Of The Complex Formed Between Phospholipase A2 And Diclofenac At 2.7 A Resolution:
authors	N.Singh, T.Jabeen, S.Sharma, T.P.Singh
compound		source
Molecule: Phospholipase A2 Vrv-Pl-Viiia Chain: A Synonym: Phosphatidylcholine 2-Acylhydrolase, Dpla2 Ec: 3.1.1.4		Organism_scientific: Daboia Russellii Pulchella Organism_taxid: 97228 Strain: Pulchella
symmetry	Space Group: P 43	R_factor 0.192 R_Free 0.211
crystal cell	length a length b length c angle alpha angle beta angle gamma 53.050 53.050 48.430 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.71 Å
ligand	DIF, SO4	enzyme	Hydrolase E.C.3.1.1.4 BRENDA
Gene Ontology	Chain Function Process Component A toxin activity
Primary reference	Specific binding of non-steroidal anti-inflammatory drugs (NSAIDs) to phospholipase A2: structure of the complex formed between phospholipase A2 and diclofenac at 2.7 A resolution., Singh N, Jabeen T, Sharma S, Somvanshi RK, Dey S, Srinivasan A, Singh TP, Acta Crystallogr D Biol Crystallogr. 2006 Apr;62(Pt 4):410-6. Epub 2006, Mar 18. PMID:16552142

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (26 Kb) [Save to disk] Biological Unit Coordinates (2b17.pdb1.gz) 23 Kb LPC: Ligand-Protein Contacts for 2B17 CSU: Contacts of Structural Units for 2B17 Likely Quarternary Molecular Structure file(s) for 2B17 Structure Factors (37 Kb) Retrieve 2B17 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2B17 from S2C, [Save to disk] Re-refined 2b17 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2B17 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2B17

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2B17, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2b17_A] [2b17] SWISS-PROT database: [P59071] Domain organization of [PA28_DABRR] by SWISSPFAM Domain found in 2B17: [PA2c ] by SMART

Other resources with information on 2B17

Community annotation for 2B17 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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