2B46 Hydrolase date Sep 22, 2005
title Crystal Structure Of An Engineered Uninhibited Bacillus Subt Xylanase In Substrate Bound State
authors S.Sansen, M.Dewilde, C.J.De Ranter, J.F.Sorensen, O.Sibbesen, K.G K.Brijs, C.M.Courtin, J.A.Delcour, A.Rabijns
compound source
Molecule: Endo-1,4-Beta-Xylanase A
Chain: X
Synonym: Xylanase A; 1,4- Beta-D-Xylan Xylanohydrolase A
Ec: 3.2.1.8
Engineered: Yes
Mutation: Yes
Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Gene: Xyna
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 61
R_factor 0.169 R_Free 0.198
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.653 60.653 95.513 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.22 Å
ligand XYP enzyme Hydrolase E.C.3.2.1.8 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
X


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk]
  • Biological Unit Coordinates (2b46.pdb1.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 2B46
  • CSU: Contacts of Structural Units for 2B46
  • Likely Quarternary Molecular Structure file(s) for 2B46
  • Structure Factors (72 Kb)
  • Retrieve 2B46 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2B46 from S2C, [Save to disk]
  • Re-refined 2b46 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2B46 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2B46
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2B46, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2b46_X] [2b46]
  • SWISS-PROT database: [P18429]
  • Domain organization of [XYNA_BACSU] by SWISSPFAM
  • Other resources with information on 2B46
  • Community annotation for 2B46 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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