2B55	Transferase	date	Sep 27, 2005
title	Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Indeno Din-101312
authors	J.Muckelbauer
compound		source
Molecule: Cell Division Protein Kinase 2 Chain: A Synonym: P33 Protein Kinase, Cdk2 Ec: 2.7.1.37 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf9 Expression_system_vector: Baculovirus
symmetry	Space Group: P 21 21 21	R_factor 0.213 R_Free 0.256
crystal cell	length a length b length c angle alpha angle beta angle gamma 71.980 72.200 53.520 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.85 Å
ligand	D31	enzyme	Transferase E.C.2.7.1.37 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Synthesis and evaluation of indenopyrazoles as cyclin-dependent kinase inhibitors. 3. Structure activity relationships at C3(1,2)., Yue EW, Higley CA, DiMeo SV, Carini DJ, Nugiel DA, Benware C, Benfield PA, Burton CR, Cox S, Grafstrom RH, Sharp DM, Sisk LM, Boylan JF, Muckelbauer JK, Smallwood AM, Chen H, Chang CH, Seitz SP, Trainor GL, J Med Chem 2002 Nov 21;45(24):5233-48. PMID:12431051

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk] Biological Unit Coordinates (2b55.pdb1.gz) 47 Kb LPC: Ligand-Protein Contacts for 2B55 CSU: Contacts of Structural Units for 2B55 Structure Factors (461 Kb) Retrieve 2B55 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2B55 from S2C, [Save to disk] Re-refined 2b55 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2B55 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2B55

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2B55, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2b55_A] [2b55] SWISS-PROT database: [P24941] Domain organization of [CDK2_HUMAN] by SWISSPFAM Domain found in 2B55: [S_TKc ] by SMART

Other resources with information on 2B55

Community annotation for 2B55 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---