2BA9 Isomerase date Oct 14, 2005
title Crystal Structure Of Cla-Producing Fatty Acid Isomerase From
authors M.G.Rudoplh, A.Liavonchanka
compound source
Molecule: Putative Aminooxidase
Chain: A
Synonym: Fatty Acid Isomerase
Engineered: Yes
Organism_scientific: Propionibacterium Acnes
Organism_taxid: 1747
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex 6-1
symmetry Space Group: C 1 2 1
R_factor 0.213 R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
133.707 60.759 72.158 90.00 115.85 90.00
method X-Ray Diffractionresolution 1.95 Å
ligand 12P, FAD, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure and mechanism of the Propionibacterium acnes polyunsaturated fatty acid isomerase., Liavonchanka A, Hornung E, Feussner I, Rudolph MG, Proc Natl Acad Sci U S A. 2006 Feb 21;103(8):2576-81. Epub 2006 Feb 13. PMID:16477020
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk]
  • Biological Unit Coordinates (2ba9.pdb1.gz) 78 Kb
  • LPC: Ligand-Protein Contacts for 2BA9
  • CSU: Contacts of Structural Units for 2BA9
  • Likely Quarternary Molecular Structure file(s) for 2BA9
  • Structure Factors (294 Kb)
  • Retrieve 2BA9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BA9 from S2C, [Save to disk]
  • Re-refined 2ba9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2BA9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BA9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BA9, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ba9_A] [2ba9]
  • SWISS-PROT database: [Q6A8X5]
  • Domain organization of [Q6A8X5_PROAC] by SWISSPFAM
  • Other resources with information on 2BA9
  • Community annotation for 2BA9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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