2BAT Hydrolase(O-Glycosyl) date Aug 10, 1992
title The Structure Of The Complex Between Influenza Virus Neurami Sialic Acid, The Viral Receptor
authors J.N.Varghese, P.M.Colman
compound source
Molecule: Neuraminidase N2
Chain: A
Ec: 3.2.1.18
Engineered: Yes
 Organism_scientific: Influenza A Virus (Atokyo31967(H2n2
Organism_taxid: 380960
Strain: Atokyo31967(H2n2)
symmetry Space Group: I 4 2 2
R_factor 0.210 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
139.600 139.600 191.000 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand BMA, CA, FUL, MAN, NAG, NGK, SIA enzyme Hydrolase E.C.3.2.1.18 BRENDA
note 2BAT (Molecule of the Month:pdb113)
related structures by homologous chain: 1IVD, 1NN2
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structure of the complex between influenza virus neuraminidase and sialic acid, the viral receptor., Varghese JN, McKimm-Breschkin JL, Caldwell JB, Kortt AA, Colman PM, Proteins 1992 Nov;14(3):327-32. PMID:1438172
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]
  • Biological Unit Coordinates (2bat.pdb1.gz) 262 Kb
  • LPC: Ligand-Protein Contacts for 2BAT
  • CSU: Contacts of Structural Units for 2BAT
  • Likely Quarternary Molecular Structure file(s) for 2BAT
  • Retrieve 2BAT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BAT from S2C, [Save to disk]
    • View 2BAT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2BAT
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BAT, from MSDmotif at EBI
  • Genome occurence of 2BAT's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2bat__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bat_A] [2bat]
  • SWISS-PROT database: [P06820]
  • Domain organization of [NRAM_I67A0] by SWISSPFAM
    • Other resources with information on 2BAT
  • Community annotation for 2BAT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science