2BBR	Viral Protein	date	Oct 17, 2005
title	Crystal Structure Of Mc159 Reveals Molecular Mechanism Of Di Assembly And Vflip Inhibition
authors	J.K.Yang, L.Wang, L.Zheng, F.Wan, M.Ahmed, M.J.Lenardo, H.Wu
compound		source
Molecule: Viral Casp8 And Fadd-Like Apoptosis Regulator Chain: A Fragment: Death Effector Domain (Residues 1-187) Synonym: V-Cflar, Viral Flice-Inhibitory Protein, V-Flip Engineered: Yes		Organism_scientific: Molluscum Contagiosum Virus Subtype 1 Organism_taxid: 10280 Strain: Subtype 1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Codon Plus Ripl Expression_system_vector_type: Plasmid Expression_system_plasmid: Modified Pet28b
symmetry	Space Group: P 21 21 21	R_factor 0.211 R_Free 0.226
crystal cell	length a length b length c angle alpha angle beta angle gamma 34.979 62.867 75.806 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.20 Å
ligand	AZI	enzyme
note	2BBR is a representative structure
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of MC159 reveals molecular mechanism of DISC assembly and FLIP inhibition., Yang JK, Wang L, Zheng L, Wan F, Ahmed M, Lenardo MJ, Wu H, Mol Cell. 2005 Dec 22;20(6):939-49. PMID:16364918

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk] Biological Unit Coordinates (2bbr.pdb1.gz) 36 Kb LPC: Ligand-Protein Contacts for 2BBR CSU: Contacts of Structural Units for 2BBR Likely Quarternary Molecular Structure file(s) for 2BBR Structure Factors (747 Kb) Retrieve 2BBR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2BBR from S2C, [Save to disk] Re-refined 2bbr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2BBR in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2BBR

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2BBR, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2bbr_A] [2bbr] SWISS-PROT database: [Q98325] Domain organization of [CFLA_MCV1] by SWISSPFAM Domain found in 2BBR: [DED ] by SMART

Other resources with information on 2BBR

Community annotation for 2BBR at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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