2BC1	Oxidoreductase	date	Oct 18, 2005
title	Structural Analysis Of Streptococcus Pyogenes Nadh Oxidase:
authors	W.H.Boles, T.C.Mallett
compound		source
Molecule: Nadh Oxidase Chain: A, B Engineered: Yes Mutation: Yes		Organism_scientific: Streptococcus Pyogenes Organism_taxid: 1314 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Xl1-Blue Expression_system_vector_type: Plasmid Expression_system_plasmid: Ptrchis A
symmetry	Space Group: P 21 21 21	R_factor 0.198 R_Free 0.241
crystal cell	length a length b length c angle alpha angle beta angle gamma 70.614 85.307 148.488 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.15 Å
ligand	FAD	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural Analysis of Streptococcus pyogenes NADH Oxidase: Conformational Dynamics Involved in Formation of the C(4a)-Peroxyflavin Intermediate., Wallen JR, Mallett TC, Okuno T, Parsonage D, Sakai H, Tsukihara T, Claiborne A, Biochemistry. 2015 Nov 17;54(45):6815-29. doi: 10.1021/acs.biochem.5b00676. Epub , 2015 Nov 6. PMID:26506002

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (158 Kb) [Save to disk] Biological Unit Coordinates (2bc1.pdb1.gz) 153 Kb LPC: Ligand-Protein Contacts for 2BC1 CSU: Contacts of Structural Units for 2BC1 Likely Quarternary Molecular Structure file(s) for 2BC1 Structure Factors (683 Kb) Retrieve 2BC1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2BC1 from S2C, [Save to disk] Re-refined 2bc1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2BC1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2BC1

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2BC1, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2bc1_B] [2bc1] [2bc1_A] SWISS-PROT database: [Q1JLP2] Domain organization of [Q1JLP2_STRPC] by SWISSPFAM

Other resources with information on 2BC1

Community annotation for 2BC1 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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