2BHW Photosynthesis date Jan 19, 2005
title Pea Light-Harvesting Complex II At 2.5 Angstrom Resolution
authors J.Standfuss, A.C.Terwisscha Van Scheltinga, M.Lamborghini, W.Ku
compound source
Molecule: Chlorophyll A-B Binding Protein Ab80
Chain: A, B, C
Synonym: Light-Harvesting Complex II, Lhcp, Lhcii Type I Ca
Organism_scientific: Pisum Sativum
Organism_common: Garden Pea
Organism_taxid: 3888
Organ: Chloroplast
Tissue: Leaves
symmetry Space Group: C 1 2 1
R_factor 0.220 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
211.400 128.000 62.000 90.00 101.80 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand CHL, CLA, DGD, LHG, LUX, NEX, XAT enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceMechanisms of photoprotection and nonphotochemical quenching in pea light-harvesting complex at 2.5 A resolution., Standfuss J, Terwisscha van Scheltinga AC, Lamborghini M, Kuhlbrandt W, EMBO J. 2005 Mar 9;24(5):919-28. Epub 2005 Feb 17. PMID:15719016
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (203 Kb) [Save to disk]
  • Biological Unit Coordinates (2bhw.pdb1.gz) 172 Kb
  • LPC: Ligand-Protein Contacts for 2BHW
  • CSU: Contacts of Structural Units for 2BHW
  • Likely Quarternary Molecular Structure file(s) for 2BHW
  • Structure Factors (371 Kb)
  • Retrieve 2BHW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BHW from S2C, [Save to disk]
  • Re-refined 2bhw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2BHW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BHW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BHW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bhw] [2bhw_B] [2bhw_A] [2bhw_C]
  • SWISS-PROT database: [P07371]
  • Domain organization of [CB22_PEA] by SWISSPFAM
  • Other resources with information on 2BHW
  • Community annotation for 2BHW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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