2BIU	Isomerase	date	Jan 26, 2005
title	Crystal Structure Of Human Cyclophilin D At 1.7 A Resolution Complex
authors	M.Hennig, R.Thoma, M.Stihle, D.Schlatter
compound		source
Molecule: Peptidyl-Prolyl Cis-Trans Isomerase Chain: X Fragment: Residues 43-207 Synonym: Cyclophilin F, Ppiase, Rotamase, Cyclophilin D Ec: 5.2.1.8 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector: Bl21(De3)
symmetry	Space Group: P 41 21 2	R_factor 0.148 R_Free 0.185
crystal cell	length a length b length c angle alpha angle beta angle gamma 57.024 57.024 87.636 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.71 Å
ligand	DMS	enzyme	Isomerase E.C.5.2.1.8 BRENDA
related structures	by homologous chain: 1H0P, 1M9E, 2BIT
Gene Ontology	Chain Function Process Component X
Primary reference	Crystal engineering yields crystals of cyclophilin D diffracting to 1.7 A resolution., Schlatter D, Thoma R, Kung E, Stihle M, Muller F, Borroni E, Cesura A, Hennig M, Acta Crystallogr D Biol Crystallogr. 2005 May;61(Pt 5):513-9. Epub 2005, Apr 20. PMID:15858260

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk] Biological Unit Coordinates (2biu.pdb1.gz) 31 Kb LPC: Ligand-Protein Contacts for 2BIU CSU: Contacts of Structural Units for 2BIU Likely Quarternary Molecular Structure file(s) for 2BIU Structure Factors (114 Kb) Retrieve 2BIU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2BIU from S2C, [Save to disk] Re-refined 2biu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 2BIU

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2BIU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2biu] [2biu_X] SWISS-PROT database: [P30405] Domain organization of [PPIF_HUMAN] by SWISSPFAM

Other resources with information on 2BIU

Community annotation for 2BIU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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