2BJO Oxidoreductase date Feb 04, 2005
title Crystal Structure Of The Organic Hydroperoxide Resistance Pr Of Bacillus Subtilis
authors D.R.Cooper, Y.Surendranath, J.Bielnicki, Y.Devedjiev, A.Joachimi Z.S.Derewenda
compound source
Molecule: Organic Hydroperoxide Resistance Protein Ohrb
Chain: A, B
Synonym: General Stress Protein 17o, Gsp17o
Engineered: Yes
Mutation: Yes
 Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21(Ril)
Expression_system_plasmid: Pmcsg7
symmetry Space Group: P 1
R_factor 0.158 R_Free 0.199
crystal
cell
length a length b length c angle alpha angle beta angle gamma
35.340 41.434 44.600 84.45 91.51 73.89
method X-Ray Diffractionresolution 2.10 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of the Bacillus subtilis OhrB hydroperoxide-resistance protein in a fully oxidized state., Cooper DR, Surendranath Y, Devedjiev Y, Bielnicki J, Derewenda ZS, Acta Crystallogr D Biol Crystallogr. 2007 Dec;63(Pt 12):1269-73. Epub 2007, Nov 16. PMID:18084074
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (2bjo.pdb1.gz) 44 Kb
  • CSU: Contacts of Structural Units for 2BJO
  • Likely Quarternary Molecular Structure file(s) for 2BJO
  • Structure Factors (179 Kb)
  • Retrieve 2BJO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BJO from S2C, [Save to disk]
  • Re-refined 2bjo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2BJO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2BJO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BJO, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bjo_B] [2bjo] [2bjo_A]
  • SWISS-PROT database: [P80242]
  • Domain organization of [OHRB_BACSU] by SWISSPFAM
    • Other resources with information on 2BJO
  • Community annotation for 2BJO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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