2BK5 Oxidoreductase date Feb 10, 2005
title Human Monoamine Oxidase B: I199f Mutant In Complex With Isat
authors C.Binda, D.E.Edmondson, A.Mattevi, F.Hubalek, A.Khalil, M.Li, N.Ca
compound source
Molecule: Amine Oxidase [Flavin-Containing] B
Chain: A, B
Synonym: Monoamine Oxidase, Mao-B
Ec: 1.4.3.4
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Pichia Pastoris
Expression_system_taxid: 4922
symmetry Space Group: C 2 2 2
R_factor 0.185 R_Free 0.206
crystal
cell
length a length b length c angle alpha angle beta angle gamma
130.843 221.990 86.072 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.83 Å
ligand FAD, ISN BindingDB enzyme Oxidoreductase E.C.1.4.3.4 BRENDA
related structures by homologous chain: 2BK3, 2BK4
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • electron transfer activity


  • Primary referenceDemonstration of isoleucine 199 as a structural determinant for the selective inhibition of human monoamine oxidase B by specific reversible inhibitors., Hubalek F, Binda C, Khalil A, Li M, Mattevi A, Castagnoli N, Edmondson DE, J Biol Chem. 2005 Apr 22;280(16):15761-6. Epub 2005 Feb 14. PMID:15710600
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (180 Kb) [Save to disk]
  • Biological Unit Coordinates (2bk5.pdb1.gz) 173 Kb
  • LPC: Ligand-Protein Contacts for 2BK5
  • CSU: Contacts of Structural Units for 2BK5
  • Likely Quarternary Molecular Structure file(s) for 2BK5
  • Structure Factors (853 Kb)
  • Retrieve 2BK5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BK5 from S2C, [Save to disk]
  • Re-refined 2bk5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2BK5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BK5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BK5, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bk5_A] [2bk5] [2bk5_B]
  • SWISS-PROT database: [P27338]
  • Domain organization of [AOFB_HUMAN] by SWISSPFAM
  • Other resources with information on 2BK5
  • Community annotation for 2BK5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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