2BKA	Transcription	date	Feb 14, 2005
title	Cc3(Tip30)Crystal Strutcure
authors	K.El Omari, L.E.Bird, C.E.Nichols, J.Ren, D.K.Stammers
compound		source
Molecule: Tat-Interacting Protein Tip30 Chain: A Synonym: Cc3 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet45b
symmetry	Space Group: P 32 2 1	R_factor 0.166 R_Free 0.191
crystal cell	length a length b length c angle alpha angle beta angle gamma 68.140 68.140 119.200 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.7 Å
ligand	GOL, NDP, PE8, SO4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of CC3 (TIP30): implications for its role as a tumor suppressor., El Omari K, Bird LE, Nichols CE, Ren J, Stammers DK, J Biol Chem. 2005 May 6;280(18):18229-36. Epub 2005 Feb 22. PMID:15728189

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk] Biological Unit Coordinates (2bka.pdb1.gz) 91 Kb LPC: Ligand-Protein Contacts for 2BKA CSU: Contacts of Structural Units for 2BKA Likely Quarternary Molecular Structure file(s) for 2BKA Structure Factors (243 Kb) Retrieve 2BKA in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2BKA from S2C, [Save to disk] Re-refined 2bka structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2BKA in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2BKA

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2BKA, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2bka] [2bka_A] SWISS-PROT database: [Q9BUP3] Domain organization of [HTAI2_HUMAN] by SWISSPFAM

Other resources with information on 2BKA

Community annotation for 2BKA at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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