2BLC Oxidoreductase date Mar 03, 2005
title Sp21 Double Mutant P. Vivax Dihydrofolate Reductase In Compl Des-Chloropyrimethamine
authors P.Kongsaeree, P.Khongsuk, U.Leartsakulpanich, P.Chitnumsub, B.Tarnchompoo, M.D.Walkinshaw, Y.Yuthavong
compound source
Molecule: Dihydrofolate Reductase-Thymidylate Synthase
Chain: A
Synonym: Dihydrofolate Reductase
Ec: 1.5.1.3
Engineered: Yes
Organism_scientific: Plasmodium Vivax
Organism_taxid: 5855
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.215 R_Free 0.280
crystal
cell
length a length b length c angle alpha angle beta angle gamma
132.000 56.310 45.670 90.00 107.50 90.00
method X-Ray Diffractionresolution 2.25 Å
ligand CP7, MES, NDP BindingDB enzyme Oxidoreductase E.C.1.5.1.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of dihydrofolate reductase from Plasmodium vivax: pyrimethamine displacement linked with mutation-induced resistance., Kongsaeree P, Khongsuk P, Leartsakulpanich U, Chitnumsub P, Tarnchompoo B, Walkinshaw MD, Yuthavong Y, Proc Natl Acad Sci U S A. 2005 Sep 13;102(37):13046-51. Epub 2005 Aug 31. PMID:16135570
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (2blc.pdb1.gz) 43 Kb
  • LPC: Ligand-Protein Contacts for 2BLC
  • CSU: Contacts of Structural Units for 2BLC
  • Likely Quarternary Molecular Structure file(s) for 2BLC
  • Structure Factors (75 Kb)
  • Retrieve 2BLC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BLC from S2C, [Save to disk]
  • Re-refined 2blc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2BLC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BLC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BLC, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2blc_A] [2blc]
  • SWISS-PROT database: [O02604]
  • Domain organization of [DRTS_PLAVI] by SWISSPFAM
  • Other resources with information on 2BLC
  • Community annotation for 2BLC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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