2BSX Transferase date May 24, 2005
title Crystal Structure Of The Plasmodium Falciparum Purine Nucleo Phosphorylase Complexed With Inosine
authors C.Schnick, A.M.Brzozowski, E.J.Dodson, G.N.Murshudov, J.A.Branni A.J.Wilkinson
compound source
Molecule: Purine Nucleoside Phosphorylase
Chain: A
Ec: 2.4.2.1
Engineered: Yes
Organism_scientific: Plasmodium Falciparum
Organism_taxid: 36329
Strain: 3d7
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_plasmid: Pet28a
symmetry Space Group: P 3 2 1
R_factor 0.264 R_Free 0.342
crystal
cell
length a length b length c angle alpha angle beta angle gamma
95.117 95.117 47.075 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand NOS enzyme Transferase E.C.2.4.2.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructures of Plasmodium falciparum purine nucleoside phosphorylase complexed with sulfate and its natural substrate inosine., Schnick C, Robien MA, Brzozowski AM, Dodson EJ, Murshudov GN, Anderson L, Luft JR, Mehlin C, Hol WG, Brannigan JA, Wilkinson AJ, Acta Crystallogr D Biol Crystallogr. 2005 Sep;61(Pt 9):1245-54. Epub 2005, Aug 16. PMID:16131758
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (2bsx.pdb1.gz) 230 Kb
  • LPC: Ligand-Protein Contacts for 2BSX
  • CSU: Contacts of Structural Units for 2BSX
  • Likely Quarternary Molecular Structure file(s) for 2BSX
  • Structure Factors (202 Kb)
  • Retrieve 2BSX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BSX from S2C, [Save to disk]
  • Re-refined 2bsx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2BSX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BSX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BSX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bsx] [2bsx_A]
  • SWISS-PROT database: [Q8I3X4]
  • Domain organization of [Q8I3X4_PLAF7] by SWISSPFAM
  • Other resources with information on 2BSX
  • Community annotation for 2BSX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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