2BSY Epstein Barr Virus dUTPase date
authors Tarbouriech, N., Buisson, M., Seigneurin, J.M., Cusack, S., Burmeister, W.P.
compound source
symmetry
R_factor
R_Free 0.187
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.50
ligand SO4, UMP enzyme
note 2BSY is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe monomeric dUTPase from Epstein-Barr virus mimics trimeric dUTPases., Tarbouriech N, Buisson M, Seigneurin JM, Cusack S, Burmeister WP, Structure. 2005 Sep;13(9):1299-310. PMID:16154087
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk]
  • Biological Unit Coordinates (2bsy.pdb1.gz) 96 Kb
  • LPC: Ligand-Protein Contacts for 2BSY
  • CSU: Contacts of Structural Units for 2BSY
  • Likely Quarternary Molecular Structure file(s) for 2BSY
  • Structure Factors (540 Kb)
  • Retrieve 2BSY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BSY from S2C, [Save to disk]
  • Re-refined 2bsy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2BSY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BSY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BSY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bsy] [2bsy_A]
  • SWISS-PROT database: [P03195]
  • Domain organization of [DUT_EBVB9] by SWISSPFAM
  • Other resources with information on 2BSY
  • Community annotation for 2BSY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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