2BUO	Viral Protein Peptide	date	Jun 17, 2005
title	Hiv-1 Capsid C-Terminal Domain In Complex With An Inhibitor Particle Assembly
authors	F.Ternois, J.Sticht, S.Duquerroy, H.G.Krausslich, F.A.Rey
compound		source
Molecule: Hiv-1 Capsid Protein Chain: A Fragment: C-Terminal Domain, Residues 278-363 Engineered: Yes		Organism_scientific: Human Immunodeficiency Virus 1 Organism_common: Hiv-1 Organism_taxid: 11676 Strain: Nl4-3 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)
Molecule: Inhibitor Of Capsid Assembly Chain: T Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: P 41 21 2	R_factor 0.224 R_Free 0.234
crystal cell	length a length b length c angle alpha angle beta angle gamma 42.541 42.541 90.903 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	ACY	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	The HIV-1 capsid protein C-terminal domain in complex with a virus assembly inhibitor., Ternois F, Sticht J, Duquerroy S, Krausslich HG, Rey FA, Nat Struct Mol Biol. 2005 Aug;12(8):678-82. Epub 2005 Jul 24. PMID:16041386

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk] Biological Unit Coordinates (2buo.pdb1.gz) 18 Kb LPC: Ligand-Protein Contacts for 2BUO CSU: Contacts of Structural Units for 2BUO Likely Quarternary Molecular Structure file(s) for 2BUO Structure Factors (76 Kb) Retrieve 2BUO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2BUO from S2C, [Save to disk] Re-refined 2buo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2BUO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2BUO

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2BUO, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2buo_T] [2buo_A] [2buo] SWISS-PROT database: [Q72497] Domain organization of [Q72497_9HIV1] by SWISSPFAM

Other resources with information on 2BUO

Community annotation for 2BUO at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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