2BVA	Transferase	date	Jun 23, 2005
title	Crystal Structure Of The Human P21-Activated Kinase 4
authors	J.E.Debreczeni, G.Bunkoczi, J.Eswaran, P.Filippakopoulos, S.Das, O.Fedorov, M.Sundstrom, C.Arrowsmith, A.Edwards, F.Von Delft, S.
compound		source
Molecule: P21-Activated Kinase 4 Chain: A, B Fragment: Kinase Domain, Residues 300-591 Ec: 2.7.1.37 Engineered: Yes Other_details: Phosphorylation On Ser 474 A And Ser 474 B		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: R (Phage Resistant) Expression_system_vector: Pgex6b Expression_system_plasmid: Pgex6b-C001
symmetry	Space Group: P 32	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 118.110 118.110 55.530 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	SEP	enzyme	Transferase E.C.2.7.1.37 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal Structures of the p21-activated kinases PAK4, PAK5, and PAK6 reveal catalytic domain plasticity of active group II PAKs., Eswaran J, Lee WH, Debreczeni JE, Filippakopoulos P, Turnbull A, Fedorov O, Deacon SW, Peterson JR, Knapp S, Structure. 2007 Feb;15(2):201-13. PMID:17292838

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk] Biological Unit Coordinates (2bva.pdb1.gz) 44 Kb Biological Unit Coordinates (2bva.pdb2.gz) 44 Kb LPC: Ligand-Protein Contacts for 2BVA CSU: Contacts of Structural Units for 2BVA Likely Quarternary Molecular Structure file(s) for 2BVA Structure Factors (665 Kb) Retrieve 2BVA in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2BVA from S2C, [Save to disk] Re-refined 2bva structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2BVA in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2BVA

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2BVA, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2bva_A] [2bva] [2bva_B] SWISS-PROT database: [O96013] Domain organization of [PAK4_HUMAN] by SWISSPFAM Domain found in 2BVA: [S_TKc ] by SMART

Other resources with information on 2BVA

Community annotation for 2BVA at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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