2BZJ Transferase date Aug 18, 2005
title Crystal Structure Of The Human Pim1 In Complex With A Ruthen Organometallic Ligand Ru3
authors J.E.Debreczeni, A.Bullock, S.Knapp, F.Von Delft, M.Sundstrom, C.Arrowsmith, J.Weigelt, A.Edwards
compound source
Molecule: Proto-Oncogene Serine Threonine Protein Kinase Pi
Chain: A
Ec: 2.7.1.37
Engineered: Yes
Mutation: Yes
Other_details: Isoform Mutation R250g
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P11-Toronto
symmetry Space Group: P 65
R_factor 0.183 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
98.887 98.887 81.028 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.05 Å
ligand ME3 enzyme Transferase E.C.2.7.1.37 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (2bzj.pdb1.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 2BZJ
  • CSU: Contacts of Structural Units for 2BZJ
  • Likely Quarternary Molecular Structure file(s) for 2BZJ
  • Structure Factors (368 Kb)
  • Retrieve 2BZJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2BZJ from S2C, [Save to disk]
  • Re-refined 2bzj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2BZJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2BZJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2BZJ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2bzj_A] [2bzj]
  • SWISS-PROT database: [P11309]
  • Domain organization of [PIM1_HUMAN] by SWISSPFAM
  • Domain found in 2BZJ: [S_TKc ] by SMART
  • Other resources with information on 2BZJ
  • Community annotation for 2BZJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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