2C07 Oxidoreductase date Aug 26, 2005
title Oxoacyl-Acp Reductase Of Plasmodium Falciparum
authors J.E.Urch, S.R.Wickramasinghe, K.A.Inglis, S.Muller, A.H.Fairlamb D.M.F.Van Aalten
compound source
Molecule: 3-Oxoacyl-(Acyl-Carrier Protein) Reductase
Chain: A
Fragment: 54-C Terminus, Residues 54-304
Synonym: Oxoacyl-Acp Reductase
Ec: 1.1.1.100
Engineered: Yes
Organism_scientific: Plasmodium Falciparum
Organism_common: Malaria Parasite
Organism_taxid: 36329
Strain: 3d7
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_variant: Codon Plus Ril
Expression_system_plasmid: Pjc40
symmetry Space Group: P 42 21 2
R_factor 0.202 R_Free 0.223
crystal
cell
length a length b length c angle alpha angle beta angle gamma
73.121 73.121 100.176 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand SO4 enzyme Oxidoreductase E.C.1.1.1.100 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceKinetic, inhibition and structural studies on 3-oxoacyl-ACP reductase from Plasmodium falciparum, a key enzyme in fatty acid biosynthesis., Wickramasinghe SR, Inglis KA, Urch JE, Muller S, van Aalten DM, Fairlamb AH, Biochem J. 2006 Jan 15;393(Pt 2):447-57. PMID:16225460
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (2c07.pdb1.gz) 162 Kb
  • LPC: Ligand-Protein Contacts for 2C07
  • CSU: Contacts of Structural Units for 2C07
  • Likely Quarternary Molecular Structure file(s) for 2C07
  • Structure Factors (321 Kb)
  • Retrieve 2C07 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2C07 from S2C, [Save to disk]
  • Re-refined 2c07 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2C07 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2C07
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2C07, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2c07] [2c07_A]
  • SWISS-PROT database: [Q8I2S7]
  • Domain organization of [Q8I2S7_PLAF7] by SWISSPFAM
  • Other resources with information on 2C07
  • Community annotation for 2C07 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
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