2C2W Transferase date Sep 30, 2005
title The Fluorinase From Streptomyces Cattleya Is Also A Chlorina Structure Of 5'-Chloro-5'-Deoxyadenosine Crystallised In Th Fluorinase.
authors A.R.Mcewan, J.H.Naismith, D.O'Hagan
compound source
Molecule: 5'-Fluoro-5'-Deoxyadenosine Synthase
Chain: A, B, C
Ec: 2.5.1.63
Engineered: Yes
Organism_scientific: Streptomyces Cattleya
Organism_taxid: 29303
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector: Pet 28c
symmetry Space Group: C 2 2 21
R_factor 0.196 R_Free 0.249
crystal
cell
length a length b length c angle alpha angle beta angle gamma
75.510 129.206 183.153 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand 5CD, CL enzyme Transferase E.C.2.5.1.63 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceThe fluorinase from Streptomyces cattleya is also a chlorinase., Deng H, Cobb SL, McEwan AR, McGlinchey RP, Naismith JH, O'Hagan D, Robinson DA, Spencer JB, Angew Chem Int Ed Engl. 2006 Jan 23;45(5):759-62. PMID:16370017
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk]
  • Biological Unit Coordinates (2c2w.pdb1.gz) 283 Kb
  • LPC: Ligand-Protein Contacts for 2C2W
  • CSU: Contacts of Structural Units for 2C2W
  • Likely Quarternary Molecular Structure file(s) for 2C2W
  • Structure Factors (838 Kb)
  • Retrieve 2C2W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2C2W from S2C, [Save to disk]
  • Re-refined 2c2w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2C2W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2C2W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2C2W, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2c2w_A] [2c2w_C] [2c2w] [2c2w_B]
  • SWISS-PROT database: [Q70GK9]
  • Domain organization of [Q70GK9_STRCT] by SWISSPFAM
  • Other resources with information on 2C2W
  • Community annotation for 2C2W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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