2C6D Transferase date Nov 09, 2005
title Aurora A Kinase Activated Mutant (T287d) In Complex With Adp
authors R.A.Pauptit, A.D.Pannifer, J.Breed, H.H.J.Mcmiken, S.Rowsell, M.A
compound source
Molecule: Serinethreonine-Protein Kinase 6
Chain: A
Fragment: Catalytic Kinase Domain Residues 124-398
Synonym: Aurora A Kinase
Ec: 2.7.1.37
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector: Ptb375nbse
symmetry Space Group: P 32 2 1
R_factor 0.230 R_Free 0.280
crystal
cell
length a length b length c angle alpha angle beta angle gamma
86.500 86.500 78.300 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.20 Å
ligand ANP, GOL, PO4 enzyme Transferase E.C.2.7.1.37 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSAR and inhibitor complex structure determination of a novel class of potent and specific Aurora kinase inhibitors., Heron NM, Anderson M, Blowers DP, Breed J, Eden JM, Green S, Hill GB, Johnson T, Jung FH, McMiken HH, Mortlock AA, Pannifer AD, Pauptit RA, Pink J, Roberts NJ, Rowsell S, Bioorg Med Chem Lett. 2006 Mar 1;16(5):1320-3. Epub 2005 Dec 5. PMID:16337122
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (2c6d.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 2C6D
  • CSU: Contacts of Structural Units for 2C6D
  • Likely Quarternary Molecular Structure file(s) for 2C6D
  • Structure Factors (240 Kb)
  • Retrieve 2C6D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2C6D from S2C, [Save to disk]
  • Re-refined 2c6d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2C6D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2C6D
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2C6D, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2c6d_A] [2c6d]
  • SWISS-PROT database: [O14965]
  • Domain organization of [STK6_HUMAN] by SWISSPFAM
  • Domain found in 2C6D: [S_TKc ] by SMART
  • Other resources with information on 2C6D
  • Community annotation for 2C6D at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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