2C6E Transferase Inhibitor date Nov 09, 2005
title Aurora A Kinase Activated Mutant (T287d) In Complex With A 5 Aminopyrimidinyl Quinazoline Inhibitor
authors R.A.Pauptit, A.D.Pannifer, J.Breed, H.H.J.Mcmiken, S.Rowsell, M.A
compound source
Molecule: Serinethreonine-Protein Kinase 6
Chain: A, B
Fragment: Catalytic Kinase Domain, Residues 123-401
Synonym: Aurora A Kinase, Serinethreonine Kinase 15, Auror Related Kinase 1, Aurora-Related Kinase 1, Hark1, Aurora-A, Tumor-Amplified Kinase;
Ec: 2.7.1.37
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Ds410(De3)
Expression_system_vector: Pet28a
symmetry Space Group: P 1 21 1
R_factor 0.200 R_Free 0.270
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.603 88.421 67.832 90.00 90.01 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand HPM BindingDB enzyme Transferase E.C.2.7.1.37 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceSAR and inhibitor complex structure determination of a novel class of potent and specific Aurora kinase inhibitors., Heron NM, Anderson M, Blowers DP, Breed J, Eden JM, Green S, Hill GB, Johnson T, Jung FH, McMiken HH, Mortlock AA, Pannifer AD, Pauptit RA, Pink J, Roberts NJ, Rowsell S, Bioorg Med Chem Lett. 2006 Mar 1;16(5):1320-3. Epub 2005 Dec 5. PMID:16337122
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk]
  • Biological Unit Coordinates (2c6e.pdb1.gz) 44 Kb
  • Biological Unit Coordinates (2c6e.pdb2.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 2C6E
  • CSU: Contacts of Structural Units for 2C6E
  • Likely Quarternary Molecular Structure file(s) for 2C6E
  • Structure Factors (384 Kb)
  • Retrieve 2C6E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2C6E from S2C, [Save to disk]
  • Re-refined 2c6e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2C6E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2C6E
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2C6E, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2c6e] [2c6e_B] [2c6e_A]
  • SWISS-PROT database: [O14965]
  • Domain organization of [STK6_HUMAN] by SWISSPFAM
  • Domain found in 2C6E: [S_TKc ] by SMART
  • Other resources with information on 2C6E
  • Community annotation for 2C6E at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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