2C9U 1.24 Angstroms resolution structure of as-isolated Cu-Zn Human Superoxide dismutase date
authors Strange, R.W., Antonyuk, S.V., Hough, M.A., Doucette, P.A., S, J.S.Valentine., Hasnain, S.
compound source
symmetry
R_factor
R_Free 0.176
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.24
ligand ACT, CU, SO4, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A
  • superoxide dismutase activit...
  • protein binding
  • anterograde axonal transport...
  • retrograde axonal transport

  • Primary referenceVariable metallation of human superoxide dismutase: atomic resolution crystal structures of Cu-Zn, Zn-Zn and as-isolated wild-type enzymes., Strange RW, Antonyuk SV, Hough MA, Doucette PA, Valentine JS, Hasnain SS, J Mol Biol. 2006 Mar 10;356(5):1152-62. Epub 2005 Dec 12. PMID:16406071
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk]
  • Biological Unit Coordinates (2c9u.pdb1.gz) 107 Kb
  • LPC: Ligand-Protein Contacts for 2C9U
  • CSU: Contacts of Structural Units for 2C9U
  • Likely Quarternary Molecular Structure file(s) for 2C9U
  • Structure Factors (931 Kb)
  • Retrieve 2C9U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2C9U from S2C, [Save to disk]
  • Re-refined 2c9u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2C9U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2C9U
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2C9U, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2c9u_A] [2c9u_F] [2c9u]
  • SWISS-PROT database: [P00441]
  • Domain organization of [SODC_HUMAN] by SWISSPFAM
  • Other resources with information on 2C9U
  • Community annotation for 2C9U at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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